Publications du SSM

Réalisations

Publications 2015

Anseeuw P., Puillandre N., Utge J. and Bouchet P., 2015. Perotrochus caledonicus (Gastropoda: Pleurotomariidae) revisited: descriptions of new species from the South-West Pacific. European Journal of Taxonomy 134: 1–23

Aznar-Cormano1 L., Brisset J., Chan T.Y. et al., 2015. An improved taxonomic sampling is a necessary but not sufficient condition for resolving inter-families relationships in Caridean decapods. Genetica 143: 195-205

BASSO D., CARAGNANO A., LE GALL L. and RODONDI G., 2015. The genus Lithophyllum in the north-western Indian Ocean, with description of L.yemenense sp. nov., L. socotraense sp. nov., L. subplicatum comb. et stat. nov. and the resumed L. affine, L. kaiseri and L. subreduncum (Rhodophyta, Corallinales). Phytotaxa 208 (3): 183–200

BAURET L., GRALL A., SENTERRE B. et al., 2015. New circumscription of Trichomanes cupressoides Desvaux (Hymenophyllaceae), an endemic filmy fern from the Seychelles (Indian Ocean), and new insights into the genus Abrodictyum C.Presl in the western Indian Ocean. Phytotaxa 202 (1): 001–014

Bénard-Capelle J, Guillonneau V, Nouvian C et al., 2015. Fish mislabelling in France: substitution rates and retail types. PeerJ 2:e714 https://dx.doi.org/10.7717/peerj.714

Ceríaco L.M.P., Marques M.P., Jacquet F. et al., 2015. Description of a new endemic species of shrew (Mammalia, Soricomorpha) from Principe Island (Gulf of Guinea). Mammalia DOI 10.1515/mammalia-2014-0056

Deharveng L., Bedos A., Daugeron C. et al., 2015. Organization, usefulness and limitations of an ATBI (All Taxa Biodiversity Inventory) : the inventory of terrestrial invertebrates in the Mercantour National Park. Zoosystema 37 (1): 9-30

Denys G.P.J., Geiger M.F., Persat H. et al., 2015. Invalidity of Gasterosteus gymnurus (Cuvier, 1829) (Actinopterygii, Gasterosteidae) according to integrative taxonomy. Cybium 39(1): 37-45

FEDOSOV A., PUILLANDRE N., KANTOR Y. and BOUCHET P., 2015. Phylogeny and systematics of mitriform gastropods (Mollusca: Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society doi: 10.1111/zoj.12278

Fuchs J. and Bowie R., 2015. Concordant genetic structure in two species of woodpecker distributed across the primary West African biogeographic barriers. Molecular Phylogenetics and Evolution 88: 64-74

Fuchs J., Ericsson P., Bonillo C. et al., 2015. The complex phylogeography of the Indo-Malayan Alophoixus bulbuls with the description of a putative new ring species complex. Molecular Ecology doi: 10.1111/mec.13337

Fuchs J., Johnson J.A., Mindell D.P., 2015. Rapid diversification of falcons (Aves: Falconidae) due to expansion of open habitats in Late Miocene. Molecular Phylogenetics and Evolution 82: 166-182.

Fuchs J. and Pons J-M., 2015. A new classification of the Pied Woodpeckers assemblage (Dendropicini, Picidae) based on a comprehensive multi-locus phylogeny. Molecular Phylogenetics and Evolution 88: 28-37

Gaubert P. and Antunes A., 2015. What's behind these scales? Comments to “The complete mitochondrial genome of Temminck's ground pangolin (Smutsia temminckii; Smuts, 1832) and phylogenetic position of the Pholidota (Weber, 1904)”. Gene 563: 106–108

Gaubert, P., Njiokou, F., Olayemi, A. et al., 2015. Bushmeat genetics: setting up a reference framework for the DNA typing of African forest bushmeat.. Molecular Ecology Resources 15: 633–651

Hernandez-Kantun J.J., Rindi F., Adey W. et al., 2015. Sequencing type material resolves the identity and distribution of the generitype Lithophyllum incrustans, and related European species L. hibernicum and L. bathyporum (Corallinales, Rhodophyta).  DOI: 10.1111/jpy.12319

Jacquet F., Denys C., Verheyen E. et al., 2015. Phylogeography and evolutionary history of the Crocidura olivieri complex (Mammalia, Soricomorpha): from a forest origin to broad ecological expansion across Africa. BMC Evolutionary Biology DOI 10.1186/s12862-015-0344-y

LE GALL L., PEÑA V., GEY D. et al., 2015. A new species of Stenogramma was uncovered Indian Ocean during the expedition Atimo Vatae: Stenogramma lamyi sp. nov. Cryptogamie, Algologie 36 (2): 189-198

Lorenz F. and Puillandre N., 2015. Conus hughmorrisoni, a new species of cone snail from New Ireland, Papua New Guinea (Gastropoda: Conidae). European Journal of Taxonomy 129: 1–15

MANGHISI A., MORABITO M., BOO G.H. et al., 2015. Two novel species of Yonagunia (Halymeniales, Rhodophyta) were uncovered in the South of Madagascar during the Atimo-Vatae Expedition. Cryptogamie, Algologie 36 (2): 199-217

Nicolas V., Grandcolas P., Braux F. et al., 2015. Recent species in old Islands: the origin of introduced populations of Litoria aurea (Anura: Hylidae) in New Caledonia and Wallis. Amphibia-Reptilia 36: 65-81

NICOLAS V., MATAAME A., CROCHET P-A. et al., 2015. Phylogeographic patterns in North African water frog Pelophylax saharicus (Anura: Ranidae).  doi: 10.1111/jzs.12094

Pante E., Abdelkrim J., Viricel1 A. et al., 2015. Use of RAD sequencing for delimiting species. Heredity 114, 450–459

Peña, V., De Clerck, O., Afonso-Carrillo, J. et al., 2015. An integrative systematic approach to species diversity and distribution in the genus Mesophyllum (Corallinales, Rhodophyta) in Atlantic and Mediterranean Europe. European Journal of Phycology DOI: 10.1080/09670262.2014.981294

Robuchon M., Valero M., Gey D. and Le Gall L., 2015. How does molecular-assisted identification affect our estimation of α, β, and γ biodiversity? An example from understory red seaweeds (Rhodophyta) of Laminaria kelp forests in Brittany, France. Genetica 143: 207-223

Samadi S, Puillandre N, Pante E. et al., 2015. Patchiness of deep-sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms. Marine Ecology 36 : 109-132

Tenorio M. J., 2015. A new Profundiconus from Northern New Caledonia: Profundiconus zardoyai sp. nov. (Gastropoda, Conilithidae). XENOPHORA TAXONOMY 6: 38-46

Veron G., Patou L.P., Debruyne R. et al., 2015. Systematics of the Southest Asian mongooses (Herpestidae, Carnivora) : solving the mystery of the elusive collared mongoose and Palawan mongoose. Zoological Journal of the Linnean Society 173: 236–248

Veron G., Patou M-L. and Jennings A. P., 2015. Molecular systematics of the small-toothed palm civet (Arctogalidia trivirgata) reveals a strong divergence of Bornean populations. Mammalian Biology 80: 347-354

VERON G., PATOU M.L., TOTH M. et al., 2015. How many species of Paradoxurus civets are there? New insights from India and Sri Lanka. J.Zool.Syst.Evol.Res. 53 (2): 161-174

Villemant C., Zuccon D., Rome Q. et al., 2015. Can parasites halt the invader? Mermithid nematodes parasitizing the yellow-legged Asian hornet in France. PeerJ DOI 10.7717/peerj.947

Zavodna M., Abdelkrim J., Pelissier V. and Machon N., 2015. A long-term study reveals complex population dynamics of multiple-source plant reintroductions


 

Publications 2014

Abbate J.L. and Antonovics J., 2014. Elevational disease distribution in a natural plant – pathogen system: insights from changes across host populations and climate. Oikos 123: 1126–1136

Bohoussou H. K., Akpatou B. K., Kadjo B. et al., 2014. Morphometric variation in the forest rodent Malacomys edwardsi (Rodentia: Muridae) in Côte d’Ivoire. Journal of Applied Biosciences 80: 7014-7023

Bussière H., Mulot B., Barrao Ruivo E., Pasquet E.,2014. Subspecies identification with mtDNA and morphometrics in captive palm cockatoos, Probosciger aterrimus. Journal of Zoo and Aquarium Reasearch 2: 1-7

Buyck B., Kauff F., Eyssartier G. et al., 2014. A multilocus phylogeny for worldwide Cantharellus (Cantharellales, Agaricomycetidae. Fungal Diversity 64: 101-121

Chazot N., Willmott K.R., Santacruz Endara P.G. et al., 2014. Mutualistic mimicry and filtering by altitude shape the structure of Andean butterfly communities. The American Naturalist 183: 26-39

Cibois A., Thibault J-C., Bonillo C. et al., 2014. Phylogeny and biogeography of the fruit doves (Aves: Columbidae). Molecular Phylogenetics and Evolution 70: 442–453

Delepine R. and Le Gall L., 2014. In Memoriam—Professor Francis Magne (1924-2014). Cryptogamie Algologie 35: 317-319

Denys G.P.J., Dettai A., Persat H. et al., 2014. Morphological and molecular evidence of three species of pikes Esox spp. (Actinopterygii, Esocidae) in France, including the description of a new species. Comptes Rendus Biologies 337: 521-534

Díaz-tapia P., Bárbara I. and Le Gall L., 2014. Lectotypification of Leptosiphonia schousboei and Ophidocladus simpliciusculus (Rhodomelaceae, Rhodophyta). Cryptogamie Algologie 35: 201-204

Echternacht L., Sano P.T., Bonillo C. et al., 2014. Phylogeny and taxonomy of Syngonanthus and Comanthera (Eriocaulaceae): Evidence from expanded sampling. Taxon 63: 47-63

Galindo L.A., Puillandre N., Strong E.E. and Bouchet P., 2014. Using microwaves to prepare gastropods for DNA barcoding. Molecular Ecology Resources doi: 10.1111/1755-0998.12231

Gallon, R.K., Robuchon, M., Leroy, B., et al., 2014. Twenty years of observed and predicted changes in subtidal red seaweed assemblages along a biogeographical transition zone: inferring potential causes from environmental data. Journal of Biogeography doi: 10.1111/jbi.12380

Hedges S.B., Marion A.B., Marin J. and Vidal N.,2014. A taxonomic framework for typhlopid snakes from the Caribbean and elsewhere (Reptilia, Squamata). Caribbean Herpetology 49: 1-61.

Hennequin S., Kessler M., Lindsay S. and Schneider H., 2014. Evolutionary patterns in the assembly of fern diversity on the oceanic Mascarene Islands. Journal of Biogeography 41: 1651-1663.

Hennequin S., Kessler M., Lindsay S. and Schneider H., 2014. The phylogeography of Eurasian Fraxinus species reveals ancient transcontinental reticulation. Molecular Phylogenetics and Evolution doi: http://dx.doi.org/10.1016/j.ympev.2014.04.021

Herrmann M., Stossier G. and Salisbury R., 2014. A new subgenus including three new species of the genus Vexillum (Gastropoda: Costellariidae) from the central Indo-Pacific with remarks on Vexillum (Pusia) semicostatum (Anton, 1838). CONTRIBUTIONS TO NATURAL HISTORY 24: 1–55

Hugot J.-P., Gu S. H., Feliu C. et al., 2014. Genetic diversity of Talpa europea and nova hantavirus (NVAV) in France. Bulletin de l’Académie Vétérinaire de France 167(3): 1-8

Jacquet F., Nicolas V., Colyn M. et al., 2014. Forest refugia and riverine barriers promote diversification in the West African pygmy shrew (Crocidura obscurior complex, Soricomorpha). Zoologica Scripta 43: 131-148.

Justine J-L., Winsor L., Gey D. et al., 2014. The invasive New Guinea flatworm Platydemus manokwari in France, the first record for Europe: time for action is now. PeerJ DOI 10.7717/peerj.297

Kool H.H. and Galindo L.A., 2014. Description and molecular characterization of six new species of Nassarius (Gastropoda, Nassariidae) from the western Pacific Ocean. American Malacological Bulletin 32(2):147-16.

Lalis A. and Lambourdiere J., 2014. Genetic variation in a north African rodent pest, Meriones shawi: microsatellite polymorphism. African Zoology 49(1): 157-160

Lalis A. and Orth A., 2014. A set of 18 polymorphic microsatellite loci in the Algerian mouse, Mus spretus Lataste 1883 (Rodentia : Muridae). Conservation Genetics Resources 6:255–258

Lejeune, L., Tabouret, H., Taillebois, L. et al., 2014. Larval traits of the Caribbean amphidromous goby Sicydium punctatum (Gobioidei: Sicydiinae) in Guadeloupe. Ecology of Freshwater Fish doi: 10.1111/eff.12208

Machin-Sanchez M., Le Gall L., Neto A.I. et al., 2014. A combined barcode and morphological approach to the systematics and biogeography of Laurencia pyramidalis and Laurencia marilzae (Rhodophyta). European Journal of Phycology 49: 115-127.

Manghisi A., Le Gall L., Ribera M.A. et al., 2014. The Mediterranean endemic new genus Felicinia (Halymeniales, Rhodophyta) recongnized by a morphological and phylogenetic integrative approach. Cryptogamie, Algologie 35: 221-243.

Modica M.V., Puillandre N., Castelin M. et al., 2014. A Good Compromise: Rapid and Robust Species Proxies for Inventorying Biodiversity Hotspots Using the Terebridae (Gastropoda: Conoidea). PlosOne 9(7): e102160

Moravec F. and Justine J-L., 2014. Philometrids (Nematoda: Philometridae) in carangid and serranid fishes off New Caledonia, including three new species. Parasite DOI: 10.1051/parasite/2014022urn:lsid:zoobank.org:pub:D4B8C03B-C1CD-42D7-9284-D300A8A0C7CD

Nicolas V., Hamani A., Amrouche L. et al., 2014. First molecular evidence for the presence of Crocidura pachyura (Mammalia, Soricidae) in Kabylie (Algeria). Mammalia 8(2): 245-249

Nicolas V., Ndiaye A., Benazzou T. et al., 2014. Phylogeography of the North African dipodil (Rodentia: Muridae) based on cytochrome-b sequences. Journal of Mammalogy 95(2): 241-253

Nicolas V., Souttou K., Gouissem K. et al., 2014. First molecular evidence for the presence of Gerbillus latastei (Rodentia, Muridae) in Algeria. Mammalia 78(2): 267-271

Pardo C., López L., Peña V. et al., 2014. A multilocus species delimitation reveals a striking number of maërl species in the OSPAR area. PLOS One 9(8): e104073

Pasquet E., Barker F.K., Martens J. et al., 2014. Evolution within the nuthatches (Sittidae : Avec, Passeriformes): molecular phylogeny, biogeography, and ecological perspectives. Journal of Ornithology doi:10.1007/s10336-014-1063-7

Peña V. Hernández-Kantún J., Grall J. et al., 2014. Detection of gametophytes in the maerl-forming species Phymatolithon calcareum (Melobesioideae, Corallinales) assessed by DNA barcoding. Cryptogamie Algologie 15 : 15-25

Peña V., Rousseau F. Reviers B. and Le Gall L., 2014. First assessment of the diversity of coralline species forming maerl and rhodoliths in Guadeloupe, Caribbean using an integrative systematic approach. Phytotaxa 190 (1): 190-215

PEREZ M., LIVOREIL B., MANTOVANI S. et al., 2014. Genetic variation and population Structure in the endangered Hermann's tortoise : the roles of geography and human-mediated processes. Journal of Heredity 105: 70-81

Pons J.M., Sonsthagen S., Dove C. and Crochet P.A., 2014.Extensive mitochondrial introgression in North American Great-Black backed Gulls (Larus marinus) from the American Herring Gull (Larus smithsonianus) with little nuclear DNA impact. Heredity 112: 226-239

Puillandre N., Bouchet P., Duda Jr. T.F. et al., 2014. Molecular phylogeny and evolution of the cone snails (Gastropoda, Conoidea). Molecular Phylogenetics and Evolution 78: 290-303.

PUILLANDRE N., STOCKLIN R., FAVREAU P. et al., 2014. When everything converges: Integrative taxonomy with shell, DNA and venomic data reveals Conus cpnco, a new species of cone snails (Gastropoda; Conoidea). Molecular Phylogenetics and Evolution 80: 186-192

Robuchon M., Le Gall L., Gey D. et al., 2014. Kallymenia crouaniorum (Kallymeniaceae, Rhodophyta), a new red algal species from the Laminaria hyperborea understorey community. European Journal of Phycology 49(3): 332-344

Robuchon M., Le Gall L., Mauger S. and Valero M., 2014. Contrasting genetic diversity patterns in two sister kelp species co-distributed along the coast of Brittany, France. Molecular Ecology 23: 2669-2685

Samadi S., Puillandre N., Pante E. et al.,2014. Patchiness of deep-sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms. HAL Archives OUvertes hal-01081793

Schoelinck C, Hinsinger DD, Dettaï A. et al., 2014. A Phylogenetic Re-Analysis of Groupers with Applications for Ciguatera Fish Poisoning. PlosOne 9(8): e98198

Silberfeld T., Rousseau F. and de Reviers B., 2014. An updated classification of brown algae (Ochrophyta, Phaeophyceae). Cryptogamie, Algologie 35(2):117-156

Taillebois L., Castelin M., Lord C. et al., 2014. New Sicydiinae phylogeny (Teleostei: Gobioidei) inferred from mitochondrial and nuclear genes : Insights on systematics and ancestral areas. Molecular Phylogenetics and Evolution 70: 260-271.

Vences M., de Pous P., Nicolas V. et al., 2014. New insights on phylogeography and distribution of Painted frogs (Discoglossus) in northern Africa and the Iberian Peninsula. Amphibia-Reptilia 35: 305-320

Verges A., Gey D., Utge J. et al., 2014. Recognition of a new species of Kallymenia (Gigartinales, Rhodophyta) from Croatia (Mediterranean Sea) based on morphology and DNA barcode. European Journal of Phycology 49: 332-344.

Veron G., Willsch M., Dacosta V. et al., 2014. The distribution of the Malay civet Viverra tangalunga (Carnivora: Viverridae) across Southeast Asia: natural or human-mediated dispersal? Journal of the Linnean Society 170: 917-932

ZUCCON A. and ZUCCON D., 2014. MrEnt: an editor for publication-quality phylogenetic tree illustrations. Molecular Ecology Resources 14: 1090–1094

 

Publications 2013

BEAREZ P., DETTAI A. and GOMON M.F., 2013. Polylepion russelli (Labridae), a trans-Indo-Pacific species. Cybium 37: 305-306.

Buyck B., Kauff F., Cruaud C., HofstetterV., 2013. Molecular evidence for novel Cantharellus (Cantharellales, Basidiomycota) from tropical African miombo woodland and a key to all tropical African chanterelles. Fungal Diversity 58: 281-298

Castelin M., Feutry P., Hautecoeur M. et al., 2013. New insight on population genetic connectivity of widespread amphidromous prawn Macrobrachium lar (Fabricius, 1798) (Crustacea: Decapoda: Palaemonidae). Marine Biology 160: 1395-1406.

Chintauan-Marquier I.C., Amédégnato C., Nichols R.A. et al., 2013. Inside the Melanoplinae: New molecular evidence for the evolutionary history of the Eurasian Podismini (Orthoptera: Acrididae). Molecular Phylogenetics and Evolution doi.org/10.1016/j.ympev.2013.09.009

DELETRE M., SOENGAS B., UTGE J. et al., 2013Microsatellite markers for the yam bean Pachyrhizus DC (Fabaceae). Applications in Plant Sciences 1(7): 1200551.

Dettai A., Debruyne R., Gallut C. et al., 2013. La mitogénomique, un nouvel outil pour l’exploration de la biodiversité et de l’évolution dans l’Océan Austral. 9èmes Journées Scientifiques - Comité National Français des Recherches Arctiques et Antarctiques.

Dubuissona J.-Y., Rouhan G., Gralla A. et al., 2013. New insights into the systematics and evolution of the filmy fern genus Crepidomanes (Hymenophyllaceae) in the Mascarene Archipelago with a focus on dwarf species. Acta Botanica Gallica: Botany Letters 160: 173-194

DUPERRON S., POTTIER M.A., LEGER N. et al., 2013. A tale of two chitons: is habitat specialization linked to distinct associated bacterial communities? FEMS Microbiology Ecology 83(3): 552-567.

ESQUER GARRIGOS Y., HUGUENY B., KOERNER K. et al., 2013. Non-invasive ancient DNA protocol for fluid-preserved specimens and phylogenetic systematics of the genus Orestias (Teleostei: Cyprinodontidae). Zootaxa 3640(3): 373-394.

FEUTRY P., CASTELIN M., OVENDEN J.R. et al., 2013. Evolution of diadromy in fish: insights from a tropical genus (Kuhlia spp.). The American Naturalist 181: 52-63.

FEUTRY P., VERGNES A., BRODERICK D. et al., 2013. Stretched to the limit; can a short pelagic larval duration connect adult populations of an Indo-Pacific diadromous fish (Kuhlia rupestris)? Molecular Ecology 22: 1518-1530.

FRY B.G., UNDHEIM E.A.B., RUDER T et al., 2013. Simultaneous multi-gland co-expression of novel toxin proteins in the mandibular, maxillary and rictal glands of the Toxicofera reptile venom system. Molecular and Cellular Proteomics 12.7: 1881-1899.

FUCHS J., PONS J.M., LIU L. et al. 2013. A multi-locus phylogeny suggests an ancient hybridization event between Campephilus and melanerpine woodpeckers (Aves: Picidae). Molecular Phylogenetics and Evolution 67: 578-588.

Gangloff B., Zino F., Shirihal H. et al., 2103. The evolution of north-east Atlantic gadfly petrels using statistical phylogeography. Molecular Ecology 22: 495-507.

Gladieux P., Devier B., Aguileta G. et al., 2013. Purifying selection after episodes of recurrent adaptive diversification in fungal pathogens. Infection, Genetics and Evolution 17: 123–131

Gu S.H., Nicolas V., Lalis A. et al., 2013. Complete genome sequence and molecular phylogeny of a newfound hantavirus harbored by the Doucet’s musk shrew (Crocidura douceti) in Guinea. Infection, Genetics and Evolution 20: 118-123

Handschuh M. and Hassanin A., 2013. Pure Banteng Bos javanicus Persist in Southern Preah Vihear Province,Central Cambodia, Despite Apparent Hybridisation with Domestic Cattle. NAT. HIST. BULL. SIAM. SOC 59(1): 57–60

Hassanin A., An J., Ropiquet A. et al., 2013. Combining multiple autosomal introns for studying shallow phylogeny and taxonomy of Laurasiatherian mammals: application to the tribe Bovini (Cetartiodactyla, Bovidae). Molecular Phylogenetics and Evolution 66: 766-775.

HEMERY L.G., ROUX M., AMÉZIANE N., ELÉAUME M., 2013. High-resolution crinoid phyletic inter-relationships derived from molecular data. Proceedings of the 14th International Echinoderm Conference. Cahiers de Biologie Marine 54: 511-523.

Hinsinger D.D., Basak J., Gaudeul M. et al., 2013. The Phylogeny and Biogeographic History of Ashes (Fraxinus, Oleaceae) Highlight the Roles of Migration and Vicariance in the Diversification of Temperate Trees. PlosOne 8(11): e80431

Houart R. and Héros V., 2013. Description of new Muricidae (Mollusca: Gastropoda) collected during the ATIMO VATAE expedition to Madagascar “Deep South”. Zoosystema doi: http://dx.doi.org/10.5252/z2013n4a5

Jacquet F., Hutterer R., Nicolas V. et al., 2013.  New status for two African giant forest shrews, Crocidura goliath goliath  and C. goliath nimbasilvanus (Mammalia: Soricomorpha), based on molecular and geometric morphometric analyses. African Zoology 48: 13-29.

Justine J-L, Rahmouni C, Gey D et al., 2013. The Monogenean Which Lost Its Clamps. PLoS ONE 8(11): e79155

KANTOR Y.I., PUILLANDRE N., FRAUSSEN K. et al., 2013. Deep-water Buccinidae (Gastropoda : Neogastropoda) from sunken wood, vents and seeps : molecular phylogeny and taxonomy. J. Mar. Biol. Assoc. UK 93:2177-2195.

Lalis A., Munoz C. and Lambourdière J., 2013. Development and characterization of 8 polymorphic microsatellite loci in a North African toad, Amietophrynus mauritanicus (Schlegel, 1841). Conservation Genetics Resources 5(4) : 1039-1041

Langenfeld A., Prado S., Nay B. et al., 2013. Geographic locality greatly influences fungal endophyte communities in Cephalotaxus harringtonia. Fungal Biology 117: 124-136.

Lautredou A.C., Motomura H., Gallut C. et al., 2013. New nuclear markers and exploration of the relationships among Serraniformes (Acanthomorpha, Teleostei): the importance of working at multiple scales. Molecular Phylogenetics and Evolution 37: 140-155.

LECOINTRE G., AMEZIANE N., BOISSELIER M.C. et al., 2013. Is the species flock concept operational? The antarctic shelf case. Plos One 8: e68787.

Le Pechon T., Pause J-B., Dubuisson J-Y. et al., 2013. Dombeya formosa (Malvaceae s. l.): A New Species Endemic to La Reunion (Indian Ocean) Based on Morphological and Molecular Evidence. Systematic Botany 38(2): 1–10

MAGGS C.A., LE GALL L., MINEUR F. et al., 2013. Fredericqia deveauniensis, gen. et sp. nov. (Phyllophoraceae, Rhodophyta), a new cryptogenic species. Cryptogamie, Algologie 34(3): 273-296.

MARIN J., DONNELLAN S.C., HEDGES S.B. et al., 2013. Hidden species diversity of Australian burrowing snakes (Ramphotyphlops). Biological Journal of the Linnean Society 110: 427–441

Marin J., Donnellan S.C., Hedges S.B. et al., 2013. Tracing the history and biogeography of the Australian blindsnake radiation. Journal of Biogeography 40: 928–937

MEROT C., MAVAREZ J., EVIN A. et al., 2013. Genetic differentiation without mimicry shift in a pair of hybridizing Heliconius species (Lepidoptera: Nymphalidae). Biological Journal of the Linnean Society 109: 830-847.

Nattier R., Grandcolas P., Pellens R. et al., 2103. Climate and Soil Type Together Explain the Distribution of Microendemic Species in a Biodiversity Hotspot. PlosOne 8(12): e80811

Nesi N., Kadjo B., Pourrut X. et al., 2013. Molecular systematics and phylogeography of the tribe Myonycterini (Mammalia, Pteropodidae) inferred from mitochondrial and nuclear markers. Molecular Phylogenetics Evolution 66: 126-137.

OLTEANU M., NICOLAS V., SCHAEFFER B. et al., 2013. Nonlinear projection methods for visualizing Barcode data and application on two data sets. Molecular Ecology Resources 13: 976–990

Pons J.M., Kirwan G.M., Porter R.F., Fuchs J., 2013. A reappraisal of the systematic affinities of Socotran, Arabian and East African scops owls (Otus, Strigidae) using a combination of molecular, biometric and acoustic data. Ibis 155: 518-533.

Robillard T. and Ming Kai Tan, 2013. A taxonomic review of common but little known crickets from Singapore and the Philippines (Insecta: Orthoptera: Eneopterinae). The raffles bulletin of zoology 61(2): 705–725

RODRIGUEZ DE LA VEGA R.C. and VIDAL N., 2013. Scorpion venom peptides. Handbook of biologically active peptides (Kastin A., chief ed.; Sabatier J.M., section ed.), Elsevier, 423-429.

Segurel L., Austerlitz F., Toupance B. et al., 2103. Positive selection of protective variants for type 2 diabetes from the Neolithic onward: a case study in Central Asia. European Journal of Human Genetics 21, 1146–1151

Sunagar K., Fry B.G., Jackson T.N.W. et al., 2013. Molecular Evolution of Vertebrate Neurotrophins: Co-Option of the Highly Conserved Nerve Growth Factor Gene into the Advanced Snake Venom. Arsenal. Plos One e81827

Taillebois L., Castelin M., Ovenden J.R. et al., 2013. Contrasting genetic structure among populations of two amphidromous fish species (Sicydiinae) in the Central West Pacific. Plos One 8(10): e75465

THUBAUD J., CORBARI L., GROS O. et al., 2013. Integrative biology of Idas iwaotakii (Habe, 1958), a ‘model species’ associated with sunken organic substrates. Plos One 8(7): e69680.

THUBAUT J., PUILLANDRE N., FAURE B. et al., 2013. The contrasted evolutionary fates of deep-sea chemosynthetic mussels (Bivalvia, Bathymodiolinae). Ecology and Evolution 3: 4748-4766.

Vanhove MPM., Tessens B., Schoelinck C. et al., 2013. Problematic barcoding in flatworms: A case-study on monogeneans and rhabdocoels (Platyhelminthes). ZooKeys 365: 355–379

VIDAL N., 2013. Interviews on How to Become an Herpetologist? In : A life for Reptiles and Amphibians (Li Vigni, F., ed.). Edition Chimaira, Frankfurt am Main, Germany, 392-393, 453-456.

 

Publications 2012

Aguirre J., Braga J.C., Reviers B. de, Woelkerling Wm J., 2012 - Reassessment of Lemoine´s types of fossil corallines (Rhodophyta  Sporolithales and Corallinales) at the Laboratoire de Cryptogamie, Muséum national d’Histoire naturelle, Paris. Cryptogamie, Algologie 33:  289-326

Arabi J., Judson M.L.I., Lourenço W.R. et al., 2012 - Nucleotide composition of CO1 sequences in Chelicerata (Arthropoda): detecting new mitogenomic rearrangements. Journal of Molecular Evolution 74: 81-95

Arca M., Hinsinger D.D., Cruaud C., Tillier A., Bousquet J., Frascaria-Lacoste N., 2012 - Deciduous trees and the application of universal DNA barcodes : a case study on the circumpolar Fraxinus. Plos One 7(3): e34089

Brosseau O., Murienne J., Pichon D. et al., 2012 - Phylogeny of Cidaroida (Echinodermata: Echinoidea) based on mitochondrial a,d nuclear markers. Organisms Diversity and Evolution 12: 155-165

Castelin  M., Lorion J., Brisset J. et al. - Speciation patterns in gastropods with long-lived larvae from deep-sea seamounts. Molecular Ecology 21: 4828-4853

Castelin  M, Puillandre N, Kantor YI, et al., 2012 - Macroevolution of venom apparatus innovations in auger snails (Gastropoda  Conoidea  Terebridae). Molecular Phylogenetics and Evolution 64: 21-44

Delsuc F., Superin A M., Tilak M.K. et al., 2012 - Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos. Molecular Phylogenetics and Evolution 62: 673-680

Dettaï A., Berkani M., Lautredou A.C. et al., 2012 - Tracking the elusive monophyly of nototheniid fishes (Teleostei) with multiple mitochondrial and nuclear markers. Marine Genomics 8: 49-58

Dettaï A., Gallut C., Brouillet S. et al., 2012 - Conveniently Pre-Tagged and Pre-Packaged: Extended Molecular Identification and Metagenomics Using Complete Metazoan Mitochondrial Genomes. Plos One 7(12):e51263. Doi:10.1371/journal.pone.0051263

Dubey B., Meganathan P.R., Vidal N., Haque I., 2012 - Molecular evidence for the nonmonophyly of the Asian natricid genus Xenochrophis (Serpentes, Colubroidea) as inferred from mitochondrial and nuclear genes. Journal of Herpetology 46: 263-268

Fedosov A.E., Puillandre N., 2012 - Phylogeny and taxonomy of the Kermia–Pseudodaphnella (Mollusca: Gastropoda: Raphitomidae) genus complex: a remarkable radiation via diversification of larval development. Systematics and Biodiversity 10: 447-477

Feutry P., Castelin  M., Grondin H. et al., 2012 - First record of Kuhlia sauvagii Regan, 1913 (Perciformes) in Mayotte and Réunion islands, Western Indian Ocean. Cybium 36: 493-494

Fuchs J., Irestedt M., Fjeldsa J., Couloux A., Pasquet E., Bowie R.C.K., 2012 - Molecular phylogeny of African bush-shrikes and allies: tracing the biogeographic history of an explosive radiation of corvoid birds. Molecular Phylogenetics and Evolution 64: 93-105

Fry B.G., Casewell N.R., Wuster W. et al., 2012 - The structural and functional diversification of the Toxicofera reptile venom system. Toxicon 60: 434-448

Gangloff B., Shirihai H., Watling D. et al., 2012 - The complete phylogeny of Pseudobulweria, the most endangered seabird genus: systematics, species status and conservation implications. Conservation Genetics 13: 39-52

Gaubert P., Bloch C., Benyacoub S. et al., 2012 - Reviving the African wolf Canis lupus lupaster in North and West Africa: A mitochondrial lineage ranging more than 6,000 km wide. Plos One 7(8):e42740. doi:10.1371/journal.pone.0042740

GRANJON L., COLANGELO P., TATARD C., COLYN M., DOBIGNY G., NICOLAS V., 2012. Intrageneric relationships within Gerbilliscus (Rodentia, Muridae, Gerbillinae), with characterization of an additional West African species. Zootaxa 3325: 1-25

Hassanin A., Delsuc F., Ropiquet A. et al., 2012 - Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes. Comptes Rendus Biologies 335: 32-50

Hémery L.G., Eléaume M., Roussel V. et al., 2012 - Comprehensive sampling reveals discordant patterns of gene flow in the Promachocrinus kerguelensis complex species (Echinodermata, Crinoidea). Molecular Ecology 21: 2502-2518

JACQUET F., NICOLAS V., BONILLO C., et al., 2012. Barcoding, molecular taxonomy and exploration of the diversity of shrews (Soricomorpha: Soricidae) on Mount Nimba (Guinea). Zool. J. Linnean Soc. 166: 672-687

Jaiswara R., Balakrishnan R., Robillard T. et al., 2012 - Testing concordance in species boundaries using acoustic, morphological, and molecular data in the cricket genus Itaropsis (Orthoptera: Grylloidea, Gryllidae: Gryllinae). Zoological Journal of the Linnean Society 164: 285-303

Kantor Y.I., Puillandre N., Rivasseau A., Bouchet P., 2012 - Checklist of Belomitra (Neogastropoda) of the Indo–Pacific with the descriptions of new species. Zootaxa 3496: 1-64

Kantor Y.I., Strong E., Puillandre N., 2012 - A new lineage of Conoidea (Gastropoda: Neogastropoda) revealed by morphological and molecular data. Journal of Molluscan Studies 78: 246-255

LALIS A., LEBLOIS R., LECOMPTE E. et al., 2012. The Impact of Human Conflict on the Genetics of Mastomys natalensis and Lassa Virus in West Africa. PlosOne 7(5): e37068

Lautredou A.C., Hinsinger D., Gallut C. et al., 2012 - Phylogenetic footprints of an antarctic radiation: the trematominae (notothenioidei, teleostei). Molecular Phylogenetics and Evolution 65: 87–101

Marin J., Donnellan S.C., Hedges S.B., Doughty P., Hutchinson M.N., Cruaud C., Vidal N., 2012 - Tracing the history and biogeography of the Australian blindsnake radiation. Journal of Biogeography 40: 928-937

Missoup A.D., Nicolas V., Wendelen W. et al., 2012 - Systematics and diversification of Praomys species (Mammalia: Muridae) endemic to the Cameroon Volcanic Line (West Central Africa). Zoologica Scripta 41: 327-345

Nattier R., Grandcolas P., Elias M. et al., 2012 - Secondary sympatry caused by range expansion informs on the dynamics of microendemism in a biodiversity hotspot. Plos One 7(11): e48047. doi:10.1371/journal.pone.0048047

NICOLAS V., HERBRETEAU V., COULOUX A. et al., 2012. A remarkable case of micro-endemism in Laonastes aenigmamus (Diatomyidae, Rodentia) revealed by nuclear and mitochondrial DNA sequence data. PlosOne 7(11): e48145

NICOLAS V., MISSOUP A.D., COLYN M. et al., 2012. West Central African Pleistocene lowland forest evolution revealed by the phylogeography of Misonne's Softfurred Mouse. African Journal of Zoology 47: 100-112

Nicolas V., Schaeffer B., Missoup A.D. et al., 2012 - Assesssment of three mitochondrial genes (16S, Cytb, COI) for identifying species in the Praomyini tribe (Rodentia: Muridae). Plos One 7(5): e36586

Olayemi A., Nicolas V., Hulselmans J. et al., 2012 - Taxonomy of the African Giant Pouched Rats (Nesomyidae: Cricetomys): molecular and craniometric evidence support an unexpected high species diversity. Zoological Journal of the Linean Society 165: 700-719

Pante E., France S.C0, Couloux A. et al., 2012 - Deep-sea origin and in-situ diversication of chrysogorgiid octocorals. Plos One 7(6): e38357. doi:10.1371/journal.pone.0038357

Perez M., Leblois R., Livoreil B. et al., 2012 - Effects of landscape features and demographic history on the genetic structure of Testudo marginata populations from South Peloponnese and Sardinia Biological. Journal of Linnean Society 105: 591–606

Puillandre N., Bouchet P., Boisselier-Dubayle M.C. et al., 2012 - New taxonomy and old collections : integrating DNA barcoding into the collection curation process. Molecular Ecology Resources 165: 700-719

Puillandre N., Modica M.V., Zhang Y. et al., 2012 - Large Scale Species Delimitation Method for Hyperdiverse Groups. Molecular Ecology 21: 2671-2691

Rodriguez de la Vega R., Vidal N., 2012 - A phylogenetic framework for the study of convergence and divergence in Scorpion venoms. Toxicon 60: 125

Ropars J., Cruaud C., Lacoste S., Dupont J., 2012 - A taxonomic and ecological overview of cheese fungi. International Journal of Food Microbiology 155: 199-210

Schoelink C., Cruaud C., Justine J.L., 2012 - Are all species of Pseudorhabdosynochus strictly host specific? A molecular study. Parasitology International 61: 356-359

Vidal N., Marin J., Sassi J. et al., 2012 - Molecular evidence for an Asian origin of monitor lizards followed by Tertiary dispersals to Africa and Australasia. Biology Letters 8: 583-588

Zuccon D., Brisset J., Corbari L. et al., 2012 - Optimized protocol for barcoding museum collections of Decapoda crustaceans: a case-study for a 10-40 years old collection. Invertebrate Systematics 26: 592-600

Zuccon D., Ericson P.G.P., 2012 - Molecular and morphological evidences place the extinct New Zealand endemic Turnagra capensis in the Oriolidae. Molecular Phylogenetics and Evolution 62: 414-426

Zuccon D., Prys-Jones R., Rasmussen P.C., Ericson P.G.P., 2012 - The phylogenetic relationships and generic limits of finches (Fringillidae). Molecular Phylogenetics and Evolution 62: 581-596